Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGP---GYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFMVYRDS-KLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD |
2OK3 Chain:A ((1-154)) | --------------------------------------------------------------------------------------------------------------------------------------------MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIK---GFMVQTGDPTGTGRGGNSIWGKKFEDEYSEY-----------LKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVID-GLETLDELEKLPVNE--KTYRPLNDVHIKDITI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79434 for 1157 contacts (-68.7/contact) +
2D Compatibility (PS) -16182 + (NN) -9870 + (LL) 8008
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -109828.0 ( -94.92 by residue)
QMean score : 0.609
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