Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLNTERT
1VLH Chain:A ((13-169))-MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENPRKKCMFTLEERKKLIEEVLSDLDGVKVDVHHGLLVDYLKKHGIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYGGDVTEWVPPEVARALNEKLK----


General information:
TITO was launched using:
RESULT:

Template: 1VLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109695 for 1203 contacts (-91.2/contact) +
2D Compatibility (PS) -17123 + (NN) -10197 + (LL) 516
1D Compatibility (HY) -19200 + (ID) 3850
Total energy: -159549.0 ( -132.63 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_1VLH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VLH-query.scw
PDB file : Tito_Scwrl_1VLH.pdb: