Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLA--GL-TVNEVTGLLAEWDYGSYEGLTTPQIRESEPD-W-----LVWTHGCPAGESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRF-AMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
1H2E Chain:A ((1-204))
----ATTLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEA--VELAAIYTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYMYGTSVTIIEVDGGTFHVAVEGDVSHIEEV---
General information:
TITO was launched using:
RESULT:
Template:
1H2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75908 for 1562 contacts (-48.6/contact) +
2D Compatibility (PS) -21254 + (NN) -8745 + (LL) 724
1D Compatibility (HY) -5600 + (ID) 2700
Total energy: -113483.0 ( -72.65 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1H2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H2E-query.scw
PDB file :
Tito_Scwrl_1H2E.pdb
: