Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEYTLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILL-NEKNLAFNLAGHVNHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNWADVQSRYAAATSQTKGLIFG
2NYB Chain:A ((1-191))--SFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFE--GKSLEEIIRSSEGGVFNNAAEVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSD-GKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLA------------


General information:
TITO was launched using:
RESULT:

Template: 2NYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83955 for 1512 contacts (-55.5/contact) +
2D Compatibility (PS) -19875 + (NN) -7971 + (LL) 1140
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -125961.0 ( -83.31 by residue)
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_2NYB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NYB-query.scw
PDB file : Tito_Scwrl_2NYB.pdb: