Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLIVDDHPAIRLAVRLLFERD-GFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVSKRENLSELLLAAKAVLAGYIHFPTGALRSI-NQQSRDNEARMLESLSDREMTVLQYLANGNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI
1A04 Chain:A ((8-215))
--TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-----ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
General information:
TITO was launched using:
RESULT:
Template:
1A04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116855 for 1606 contacts (-72.8/contact) +
2D Compatibility (PS) -22208 + (NN) -15287 + (LL) 200
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -168550.0 ( -104.95 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_1A04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A04-query.scw
PDB file :
Tito_Scwrl_1A04.pdb
: