Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPREHGKRSIDNETRSALKRQRPAVIWLTGLSGAGKSTIASALELALFE-QKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSRELIG--------IEHFIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA
1M7G Chain:A ((3-204))
-TNITFHASALTRSERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDTKGYL
General information:
TITO was launched using:
RESULT:
Template:
1M7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91441 for 1521 contacts (-60.1/contact) +
2D Compatibility (PS) -21789 + (NN) -12935 + (LL) 208
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -143557.0 ( -94.38 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1M7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M7G-query.scw
PDB file :
Tito_Scwrl_1M7G.pdb
: