Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDYQET--LYQGYGQRFSIDNMLHEVRTEHQHLVIFENARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFVATTEERFDVIISDSTDPIGPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTAARTDGLFADWHFYQAAVPTYIGGAMTFAWGSTHEGLRRLPLETLRQRFRD-SGIATRYYNADIHLGAFALPQYVLQAIGKQDND |
2PT6 Chain:A ((42-320)) | -KWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTDTGLT--KPN--KKLESKEFADLKYYNYENHSAAFKLPAFLLKEIENI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166820 for 2372 contacts (-70.3/contact) +
2D Compatibility (PS) -29744 + (NN) -12909 + (LL) 312
1D Compatibility (HY) -27200 + (ID) 4850
Total energy: -241211.0 ( -101.69 by residue)
QMean score : 0.470
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