Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPVLWRLLRTYRWRLAAAMGLQALAGLCSL-LPWMLLAWLAEPLARG-Q---AQPALLALVLLAVLAWLGCQALAAHLAHRVDADLCNDLRLRLLAHLQRLPLDWFGRQGPDGVARLVEQDVRALHQLIAHAPNDLSNLLVVPLVALLWLAWLHPWLLLFCLL--PLVLAAAGFLLLRSARYRDLVLRRNAALERLSADYGEFAHNLLLARQYPGAGIQQGAEASAAAFGEAFGAWVKRVGHLAALVYV--QLSTPW-LLAWVLLGALALDALGVPLALGQACAFLLLLRALAAPVQALGHGGDALLGARAAAERLQQVFDQAPLAEGRS-------TREPVDGAVALHGLGHAYEG---VEVLADIDLELEDGSLVALVGPSGSGKSTLLHLLARYMDAQ---RGELEVGGLALKDMPDAVRHRHIALVGQQAAALEISLADNIALFRPDADLQEIRQAARDACLDERIMALPRGYDSVPGRD-LQLSGGELQRLALARALLSPASLLLLDEPTSALDPQTARQVLRNLRERG--GGRTRVIVAHRLAEVSDADLILVLVAGRLVERGEHAALLAA--DGAYARLWREQNGAEVAA |
| 3WMG Chain:A ((29-598)) | ---------------IVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGETWKYSVGFVGIGVFEFIVAGSRTALFGIASERLARDLRVAAFSNLVEQDVTYFDRRKAGELGGKLNNDVQVIQYSFSK-LGAVLFNLAQCVVGIIVAFIFAPALTGVLIALSPLVVLAV---VVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQR---YGSKLDPLYRLGRRRYISDGLFFGLSMLVIFCVYALALWWGGQLI-ARGS-LNLGNLLTAFFSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLAS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -344230 for 4004 contacts (-86.0/contact) +
2D Compatibility (PS) -60632 + (NN) -52786 + (LL) 2564
1D Compatibility (HY) -30800 + (ID) 6700
Total energy: -492584.0 ( -123.02 by residue)
QMean score : 0.386
|
|
|