Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVRNQEKAACLKLCGNLGQISIFKGDFFDEKLILESVE--ECNVVINLVGILYEV----KEHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGIENS-------------KLSEYAQSKLKGEKAVTAAFPEAIIIKPSLVFGKEDNFFTKFARLATILPFLPLIGSGTTKFQPICVTDLAEMVYRIINLNKQDKKIYNIGGPKIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEK-STDFEAIKIRPLSIENVVPEYLKVYKKY |
| 1VL0 Chain:A ((12-291)) | -HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFP----------------------RPA-------KRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216045 for 2251 contacts (-96.0/contact) +
2D Compatibility (PS) -28732 + (NN) -12964 + (LL) 4592
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -260649.0 ( -115.79 by residue)
QMean score : 0.493
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