Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MITLNNLNCCTKFGIELEFYTEGIEREHLFLNSVKNKI----------------------------------------------ALLGFSCKKESSTH------QYEIKSGCYNDSNNLIKHFDLAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNEQKYSDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLGSK--CRLEHRVPGADCNLEKVLIAIIEGITFGIENKIAP--PNRVYGIASDPQYKMENLV---------------------------------------------- |
| 1LGR Chain:? ((101-468)) | DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATR-FNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLV-----PPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103307 for 1903 contacts (-54.3/contact) +
2D Compatibility (PS) -24976 + (NN) -7664 + (LL) 180
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -146167.0 ( -76.81 by residue)
QMean score : 0.350
|
|
|