Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDF---GITDVIILEKGTVGHSFKHW---PKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAE-----------YLQVVANHYELNIFENT-VVTNISAD--DAYYTIATTT---ETYHADYIFVATGDYNF-PKKP---FKYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPI-VQQ-LFVTTN-QDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 1XDI Chain:A ((2-342)) | --VTRIVILGGGPAGYEAALVAATSHPETT-QVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFH-------------KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDGERILTWRQLYDLDAL-PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-YED------ADAALVLEESFAER-GVRLFKNARAASVTRTGAGVLVTMTDGRTVEG-SHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSR-TLATGIYAAGDCTGLLP----LASVAAMQGRIAMYHALGE-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179615 for 2506 contacts (-71.7/contact) +
2D Compatibility (PS) -33002 + (NN) -11954 + (LL) 3492
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -227979.0 ( -90.97 by residue)
QMean score : 0.366
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