Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEKKERIIKTSIRLFAKKGFAATTIQEIASECGISKGAFYLHFKSKEALLLSACEYYI-GMSMNKMKNIEEDL--AGKPPKEVL-KKQIGAQFEDFRDHKDFIVLLLTENIIPENQEIKQYFYKVTMETDKLYRNALLVSYGEGIERYVADLSIMARGIVHSYMNVMVFNGELNIDAEEISAFIIERLDDLVQGLSRSALNPIVSKDIFNPMPAGKDQLLEDIQKVKENSTLPEDITVSL-DVIEEELTQDKPRKPIIKGMLSNLA-GTNDKEVER-LRALILS-LSQFDHKKSSL
1ZKG Chain:A ((13-211))VLSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQA----YMSVTEKLQKEFENFLMKNRNRDIFDFMERWIEKKLEYSASHPEEADFLITLVSV--DEGLRKRILLDLEKSQRVFFDFVREKLKDLDLA---------------------------------------------------------------------------------EDVTEEIALKFLMWFFSGFEEVYLRTYQGKPELLKR-DMNTLVEEVKVMLRILKKGMTK---------


General information:
TITO was launched using:
RESULT:

Template: 1ZKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 622 -61199 -98.39 -320.41
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -98.39
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_1ZKG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZKG-query.scw
PDB file : Tito_Scwrl_1ZKG.pdb: