Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRLTGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPDEFGEPYREALTKLQKDAPPLPASKVHRVLDGQLGTKWRERFSSFN-DTPVASASIGQVHKAIWS-DGREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVASAPKVVIQEWIEGVPMAEIIRHG-----------TTEQRDLIGTLLAELTFDAPRRLGLMHGDAHPGNFMLLPDGRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVSVREIDEMLRQYVEPIQVEVFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAIPMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
| 5D9H Chain:A ((18-184)) | -------------------------------------------------------------------------------------------------------------------------------DAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQ---TSMDELLKEIQAMS-------------------------QCSHPNVVTYYTSFVVKDELW-----------LVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEG-LDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLA--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5D9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49136 for 1047 contacts (-46.9/contact) +
2D Compatibility (PS) -16096 + (NN) -8834 + (LL) 23316
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -59750.0 ( -57.07 by residue)
QMean score : 0.329
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