Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP--YPMYPATTSLVNVVPK-LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP |
3EB0 Chain:A ((7-328)) | -KKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP-SEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL-GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHY--VRFPTLK-AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145845 for 2111 contacts (-69.1/contact) +
2D Compatibility (PS) -29667 + (NN) -15661 + (LL) 452
1D Compatibility (HY) -27600 + (ID) 5000
Total energy: -223321.0 ( -105.79 by residue)
QMean score : 0.557
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