Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLIVANWKMNGTRSLFVNFIGKLNDKSN-EITSKLVICPPFTSLPGNIELN-SNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPI---HGEYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTS---------KKHVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY
1O5X Chain:A ((3-247))
RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKE-SFVDIIKSAM---
General information:
TITO was launched using:
RESULT:
Template:
1O5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125368 for 1895 contacts (-66.2/contact) +
2D Compatibility (PS) -24861 + (NN) -7561 + (LL) 236
1D Compatibility (HY) -15600 + (ID) 3900
Total energy: -177054.0 ( -93.43 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1O5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5X-query.scw
PDB file :
Tito_Scwrl_1O5X.pdb
: