Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIK--KFSHFNGGFG---EFFSVTLSDGKNVI---IVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQL----NDAE---KSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLK--PSRGMESMKYDMAGSAAVVGVMRTLAGRKA-RINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD |
| 3T8W Chain:E ((55-517)) | ---------------------ENGPVKISSKV-NDKQVSEFLKDENMEKFNVKLGTSKHFY--MFNDNKNSVAVGYVGCGSVADLSEADMKRVVLSLVTMLHDNKLSKLTVVFEINVDKNLFRFFLETL-FYEYMT--DERFKS-------EYIKHLGVYINNADTYKEEVEKARVYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAE-KLGVDYIVDIATLTGAMLYSLGTS-YAGVFGNNEELINKILQSSKTSNEPVWWLPIINEYRATLNSKYADINQIS-SSVKASSIVASLFLKEFVQNTAWAHIDIAGVSWNFKAR--KPK---GFGVRLLTEFVLN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193344 for 3812 contacts (-50.7/contact) +
2D Compatibility (PS) -46782 + (NN) -18400 + (LL) 4512
1D Compatibility (HY) -39600 + (ID) 8300
Total energy: -301914.0 ( -79.20 by residue)
QMean score : 0.505
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