Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHL------------SIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
3OZF Chain:A ((55-243))
YKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQ-STGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKK-
General information:
TITO was launched using:
RESULT:
Template:
3OZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121990 for 1364 contacts (-89.4/contact) +
2D Compatibility (PS) -19006 + (NN) -3079 + (LL) 24
1D Compatibility (HY) -19200 + (ID) 2850
Total energy: -166101.0 ( -121.77 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3OZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZF-query.scw
PDB file :
Tito_Scwrl_3OZF.pdb
: