Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQKPVDNITQIIGGTPVVKLRNVVDDN-------AADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTIVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGFIPGTLNTEIYDSIIKVGNDTAMEMSRRVAKEEGILAGISSGAAIYAAIQKAKEL---GKGKTVVTVLPSNGERYLSTPLYSFDD |
| 3DWG Chain:A ((3-311)) | --MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADLP--EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGVYAL-------RNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79372 for 2677 contacts (-29.6/contact) +
2D Compatibility (PS) -33286 + (NN) -18443 + (LL) 104
1D Compatibility (HY) -20800 + (ID) 5850
Total energy: -157647.0 ( -58.89 by residue)
QMean score : 0.519
|
|
|