Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
2BBW Chain:A ((28-234))
LRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELEN-RRGQHWLLDGFPRTLGQAEALDKI-----CEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSN-
General information:
TITO was launched using:
RESULT:
Template:
2BBW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68474 for 1513 contacts (-45.3/contact) +
2D Compatibility (PS) -22164 + (NN) -9619 + (LL) 688
1D Compatibility (HY) -18400 + (ID) 4050
Total energy: -122019.0 ( -80.65 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_2BBW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BBW-query.scw
PDB file :
Tito_Scwrl_2BBW.pdb
: