Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MESVKTVKTNKVGKNTE-------TANTEASKETHFKQASAIT--NTLRSIGGIFTKIAKKVRELVKKHPKKSSVALVVLTHIA-CKRAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSTGDIDKQIELEQEKKEANKSGIKLEQERQKTEQERQKTNKSEIELEQE--------------------RQKTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQEKHGQLFIKKARIKTGITTGIAIEIEAECKTPKPAKTNQTPIQPK-----HLPNSKQP------------RSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRNPQAHLPTSQSLLFVQKIFADINKEIEAVANTEKKTEKAGYGYSKRM |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFS---------KLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGWREMVDTLHMPWRDEGVYLITGGAGSLGLLFAKEIANRTGRSTIVLTGRSVL--SEDKENELEALRSIGAEVVYREADVSDQHAVRHLLEEIKER-----------YGTL--------NGIIHG-AGSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDFPLDFFIFFSSVSGCLGNAGQADYAAANSFMDAFAEYRRSLAASKKRFG-STISFNWPL---------WEEGGMQVGAEDEKRMLKTTGMVP-MPTDSGLKAFYQGIVSDKPQVFVMEGQLQKMKQKLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 218331 for 2693 contacts (81.1/contact) +
2D Compatibility (PS) -38469 + (NN) -7397 + (LL) 3608
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: 157973.0 ( 58.66 by residue)
QMean score : 0.183
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