Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAISI--KSPKEIKALRKAGELTAQALALLEREVRPGVSLLELDKMAEDFIKSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTD-YVLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITE--RG----FVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTER
3TAV Chain:A ((29-284))-KKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPSFLGYHGFPASICSSVNDQVVHGIPSATAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIGRSMHLDPFLPNEGA----PGKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVTEAGPRILTMR


General information:
TITO was launched using:
RESULT:

Template: 3TAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138702 for 2225 contacts (-62.3/contact) +
2D Compatibility (PS) -26872 + (NN) -8935 + (LL) 356
1D Compatibility (HY) -12800 + (ID) 4500
Total energy: -191453.0 ( -86.05 by residue)
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_3TAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TAV-query.scw
PDB file : Tito_Scwrl_3TAV.pdb: