Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIKTFLECALKEDLGH-----GDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMT---GIECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSPKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLKHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMSAGADIVMCDNMSVGETKEIAAYREAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKMA |
| 1QAP Chain:A ((21-295)) | -DIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLH-PDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRV---NGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRFC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135150 for 2118 contacts (-63.8/contact) +
2D Compatibility (PS) -28833 + (NN) -10481 + (LL) 360
1D Compatibility (HY) -14400 + (ID) 4750
Total energy: -193254.0 ( -91.24 by residue)
QMean score : 0.466
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