Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNNFLWGGATASYQCEGAWDVDGKAESMWDYYLHE-----AGLENGDVASDHYHRYEEDIRMMKEGGQNSYRFSLSWPRIIKNRQG--DINLKGIEFYQNLLDTCKKYDIEPFVTLYHWDLPQYWEETGGWLDHDVCAAFEHYAKVCYDHFGDKITNWTTFNEPKWFVANGYKIGNYPPGYQDT-QKTMIAAYNVMYASALGVKAFKEGGY---PGQIGIVHSYTPVNGIDE-SIETKIAMRYADNYCNNWILDTAALGEFPVDLIAELAK-S-------HDISFMKTDELQTIKQNTVDFIGLNYYSRTLVKPYTGGETQLQFNHSGKKGE-SKVLIKNWFEQVKDPANETTEWDTE-IYPKGLQDGLIEAYERYQ-LPLYVTENGIGVREDVSVPQVDDAYRIAFMNDHINAIFNAI-DAGCDVRGYYAWSPFDLYSWKNGVEKRYGLVAVDFEN-NQIRKPKASYYWFKEMIESQGKLIKRREF |
1WCG Chain:A ((5-463)) | FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAPSG-VMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIAVC-KGYSIKAYAPNLNLKTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGT-ADFYALNHYSSRLVTFGSDPN----------PNFNPDASYVTS---VDEAWLKPNETPYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDD-----GQLDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNVVSTGK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138451 for 3892 contacts (-35.6/contact) +
2D Compatibility (PS) -46991 + (NN) -25069 + (LL) 2428
1D Compatibility (HY) -30000 + (ID) 7050
Total energy: -245133.0 ( -62.98 by residue)
QMean score : 0.503
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