Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELD-INSYICYNGQYVIFE-GKEIYAKPLPTESLERLITVASEHE-HPIVFSGKDSMRANLPDHDRVTIGMNSIKREYPKVDANYYKGRDIYQCLLFCDESY--DAY---YREEFK-QYGFLRWHDVS-VDVCPADGSKAEGIKQMIKKLGFSMKDTYAFGDGLNDIAMLQTVGTGVAMGNGRDEVKAVADY--VTSHVDDDGVYNALKQLKLI
3PGV Chain:A ((21-284))-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHR------FFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVS-FSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL-


General information:
TITO was launched using:
RESULT:

Template: 3PGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115895 for 2062 contacts (-56.2/contact) +
2D Compatibility (PS) -28076 + (NN) -19742 + (LL) 1028
1D Compatibility (HY) -15200 + (ID) 2950
Total energy: -180835.0 ( -87.70 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_3PGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PGV-query.scw
PDB file : Tito_Scwrl_3PGV.pdb: