Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILLIGASGTLGSAVKDRLEK-KAEVITAGRHSG----------------DVTVDITSIDSIKKMYEQ----VGKVDAIVSATGSATFS--PLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQ-GASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLE--------------SFFQGFVPVPAAKVARAFEKSVFGA---QTGESYKVY |
| 2BGK Chain:A ((17-259)) | KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVID |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79061 for 1597 contacts (-49.5/contact) +
2D Compatibility (PS) -21074 + (NN) -4376 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: -110761.0 ( -69.36 by residue)
QMean score : 0.429
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