Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIITEVYAREVLDSRGNPTVEVEVYTEAGA----------FGRALVPSGASTGEYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPNKGKLGANAILGVSLAAARAAADELGVHLYEYLGGVNG---KVLPVPMMNILNGGEHADNNVDVQEFMVMPVGAPNFKE---ALRMGAEILHALKAVLKGKG--LNTGVGDEGGFAPNLKSNEEALE-TIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELKG--------EGVTRTSEEMVTWYEEMITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIANSILIKVNQIGTLTETLDAIEMAKRAGYTAVISHRSGETEDSTIADIAVATNAGQIKTGAPTRTDRVAKYNQLLRIEDNLADLAEYHGNDTFYNLKK |
| 3QTP Chain:A ((5-439)) | SMSIQKVHAREILDSRGNPTIEVEITTGKGMFRSCVPSGASTGVHEAVELR-----------DGDKKRYGGKGVLKAVENVNTIIGPALLGKNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAGNALAMQEFMICPTGATNFHEALRMAAET---YQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVE-AIAKAG--YTGKIEIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHG-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFIADLVVGLNCKQIKTGAPCRSERLCKYNQLMRIEEELGN-IPYAGKN-WRNS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103585 for 3713 contacts (-27.9/contact) +
2D Compatibility (PS) -45035 + (NN) -23749 + (LL) 1876
1D Compatibility (HY) -31600 + (ID) 10350
Total energy: -212443.0 ( -57.22 by residue)
QMean score : 0.523
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