Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCLDTEEVQLIITDIMMPMMDGYQLIQELRSAAYNVPIIVMTAKSQMEDMTKGFGLGADDYMVKPVQLQELALRIKALLRRANIVAQHQLIIGNTCLNEDELSLKYFEQEIVFPQKEFRVLFHLLSYPNRIFTRLELLDSIWGMDTDLDERVVDACINKIRRKVEHLPDFKIETVRGVGYRAKND--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1NY5 Chain:A ((1-384))-MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFES--------------------------------------------PKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV


General information:
TITO was launched using:
RESULT:

Template: 1NY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -88939 for 1206 contacts (-73.7/contact) +
2D Compatibility (PS) -19077 + (NN) -5690 + (LL) 3932
1D Compatibility (HY) -14800 + (ID) 1850
Total energy: -126424.0 ( -104.83 by residue)
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_1NY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NY5-query.scw
PDB file : Tito_Scwrl_1NY5.pdb: