Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMIL-NDNHKIPTLGLGTWMINNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIKE----SGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSPQPW-----------------------KEWRETDKHFDQGNL
1US0 Chain:A ((2-154))
--ASRILLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLV
General information:
TITO was launched using:
RESULT:
Template:
1US0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33801 for 905 contacts (-37.3/contact) +
2D Compatibility (PS) -13326 + (NN) -3960 + (LL) 260
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -65177.0 ( -72.02 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_1US0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1US0-query.scw
PDB file :
Tito_Scwrl_1US0.pdb
: