Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLFTHINSFVWGPPLLALLVGTGIYLSFRLGFIQLRQLSRAFKLIFREDNGQGDISSYAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGLLAIKYRTKDTNGEISGGPMYYIVNGMGQKWKPLAVFFSAAGILVALLGIGTFTQVNAIASALEH--TFKISTRFTSLILAVIVLFIIFGGIKSISKVSEKIVPFMAISYILATLIIIAVNYNKIPHTFQLIFSGAFSGTAAIGGFSGAIVKEAIQKGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLISMTGTFIDTIVICTLT-GIAILVTGKWLEFDLQGAPLTQASFNTVFGSLGSFALTFCLVLFAFTTILGWSYYGERCFEYLFGTKFINAYRIIFVIMVGLGGFLQLDLIWVIADIVNGLMALPNLIALLVLSPIIVKETQKYFSETKNITKP |
2B2A Chain:A ((13-191)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------MLTRKEDLLTVLKQISALKYVSNLYEFLLAT-------EKIVQTSELDTQFQEFLTTT-------IIASEQNLVENYKQMTIKQVIDDSIILLGNKQNYVQQIGTTTIGFYVEYRQT-LYSSNFRNLLNIF------GEEDFKYFLIDFLVFTKVEQNGYLQVAGVCLNQYFSVQVKQKKWYKNN---------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2B2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106941 for 1121 contacts (-95.4/contact) +
2D Compatibility (PS) -17174 + (NN) -1601 + (LL) 22960
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -112056.0 ( -99.96 by residue)
QMean score : 0.236
|
|
|