Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANYPKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLIAGDVGEEEFCNEAVEKTVKELGGLDILVNNAGEQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKP--GSAIINTTSINPYVGNPTLIDYTATKGAINAFTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPEETVAQFGQDTPMGRPGQPVEHVGCYVLLASDESSYMTGQTLHVNGGNFVTT
3GAF Chain:A ((5-253))-----------------------------------SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSE-GAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK-PF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE-


General information:
TITO was launched using:
RESULT:

Template: 3GAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1392 -125182 -89.93 -506.81
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -89.93
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_3GAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GAF-query.scw
PDB file : Tito_Scwrl_3GAF.pdb: