Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGQMFKVEIVTRPANFEKLKQELGKIGVTSLTFSNVHGCGLQKAHTELYRGVKIESNVYERLKIEIVVSKVPVDQVTETAKRVLKTGSPGDGKIFVYEISNTINIRTGEEGPEAL
2NS1 Chain:B ((4-116))---SMKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEFSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL


General information:
TITO was launched using:
RESULT:

Template: 2NS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 423 -52337 -123.73 -463.16
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -123.73
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_2NS1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NS1-query.scw
PDB file : Tito_Scwrl_2NS1.pdb: