Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRGRA------------------------DDTDDVILNRMKVYRDETAPLLEYYRD--QLKTVDAVGTMDEVFARALRALGK
4JL5 Chain:A ((1-202))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFP---KHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVI--
General information:
TITO was launched using:
RESULT:
Template:
4JL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75727 for 1364 contacts (-55.5/contact) +
2D Compatibility (PS) -19616 + (NN) -14025 + (LL) -404
1D Compatibility (HY) -19200 + (ID) 4150
Total energy: -133122.0 ( -97.60 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_4JL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JL5-query.scw
PDB file :
Tito_Scwrl_4JL5.pdb
: