Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
3H81 Chain:A ((24-278))
--YETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
General information:
TITO was launched using:
RESULT:
Template:
3H81.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127489 for 2100 contacts (-60.7/contact) +
2D Compatibility (PS) -27765 + (NN) -9347 + (LL) 260
1D Compatibility (HY) -30400 + (ID) 12750
Total energy: -207491.0 ( -98.81 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_3H81.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H81-query.scw
PDB file :
Tito_Scwrl_3H81.pdb
: