Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDV-------VGGLGDRARFAQADVTDEAAVSNALELA-DSLGPVRVVVNCAG-TGNAIRVLSRDGVF---PLAAFRKIVDINLVGTFNVLRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIRLDGAIRMAPR |
2CFC Chain:A ((4-192)) | ------VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGN-----SEAGVLHTTPVEQFDKVMAVNVRGIF----LGC-RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95318 for 1446 contacts (-65.9/contact) +
2D Compatibility (PS) -18666 + (NN) -3620 + (LL) 5112
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -130392.0 ( -90.17 by residue)
QMean score : 0.512
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