Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADLDLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGIMPVGRIVDEPDPVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGE-IYAVGVATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGTGG----------------IKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE |
2AG5 Chain:A ((2-234)) | ------------GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-PGIQTRVLDVTKKKQIDQFANE----VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG-RFATAEEIAMLCVYLASDESAYVTG---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106413 for 1805 contacts (-59.0/contact) +
2D Compatibility (PS) -22609 + (NN) -3489 + (LL) 5164
1D Compatibility (HY) -10800 + (ID) 3050
Total energy: -141197.0 ( -78.23 by residue)
QMean score : 0.483
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