Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPLV----GGEFVDLTDAYSPRLRELARQSD----PQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF |
4UC0 Chain:A ((25-286)) | -------------PAVDLLIDRLNGLLPRIAIVLGSGLGGLVDEVENA-VRIPFADIPGFP--------KELVAGLFAGQPIIMLAGRVHYYEEGDAAAMRLPIETLASLGVTTLILTNAAGSLRADMPPGSVMQLIDHINFSGHNPLIGETGDGRFVGMTQAYDGELAEAMRRAADAEDISLSSGVYMWFSGPSFETPAEIRMARTLGADAVGMSTVPEVILARFFGLKVAAASVITNYGAGMT----------DMAPIGGRRLVAILKRMIVDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92413 for 1764 contacts (-52.4/contact) +
2D Compatibility (PS) -23052 + (NN) -1553 + (LL) 1056
1D Compatibility (HY) 4000 + (ID) 1550
Total energy: -113512.0 ( -64.35 by residue)
QMean score : 0.285
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