Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFRKTLLITGASSGFGQALAREALDAGHRVVGTVRSEEARSALEAV-----APGQAFGRLLDVTDLAAIEPTVAAIERDIGPLDVLVNSAGYGHEGILEESPLAEMRRQFEVNLFGAVAMIQAVLPYMRRR------RRGHILNITSMGGYITMPGIAYYCGSKFALEGVSEALGKEVAGLGIAVTAVAPGSFRTDWAGRSMVRSPRTIADYDALFDPVRQARQEKSGKQPGDPRKAARAMLQAIDAENPPAHLLLGSDALGLVRQKLKALEEEIAAWEEVTRSTDG
3IOY Chain:A ((4-279))-FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVK------------------------------AGVHEFGMEPDVIGARVIEAMKAN--RLHIFSHPDHKEELREVFDEIIAEYQDYPKDPGYDQR


General information:
TITO was launched using:
RESULT:

Template: 3IOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120487 for 1936 contacts (-62.2/contact) +
2D Compatibility (PS) -26355 + (NN) -15815 + (LL) 1948
1D Compatibility (HY) -14000 + (ID) 2850
Total energy: -177559.0 ( -91.71 by residue)
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_3IOY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IOY-query.scw
PDB file : Tito_Scwrl_3IOY.pdb: