Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRI-RPRFYEPDVQR--MAAPLGELFAAVGVRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAG-IDAAFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAI-GASMGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRASTLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKK----------IKTEINGVWIYPPAADRAVALAAADPLIPVVA---------------- |
| 1D7Y Chain:A ((5-405)) | ALKAPVVVLGAGLASVSFVAELRQA-----GYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGR----TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL---------RPQSRLLIVGGGVIGLELAATARTA---------GVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERI---ETWSNAQNQGIAVARHLVDPTAPGYAELP-WYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKLAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208257 for 3081 contacts (-67.6/contact) +
2D Compatibility (PS) -39604 + (NN) -10398 + (LL) 2204
1D Compatibility (HY) -12800 + (ID) 4550
Total energy: -273405.0 ( -88.74 by residue)
QMean score : 0.407
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