Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGNRGVVYLGPG-KVEVQNIPYPKMQDPQGRQIDHGVILRVVSTNICGSDQHMVRGRTT-APEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARAGGA-----------YGYVD-MGGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQGFEIADLSKDTP--LHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQQEAPATVLNSLMGITRVA-GKIGIPGLYVTEDPGAVDAAAKHGALSIRFGLGWAKSHSFHTGQ---TPVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGVPKKFVIDPHNLFRAA |
3UKO Chain:A ((6-377)) | VITCKAAVAYEPNKPLVIEDVQVAPPQ-A------GEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPTAP----LDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLT-DGGVDYSFECIGNVS---------------VMRAALECCHKGWGTSVIVGVAASGQEI-----------STRPF-QLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIK-VDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208301 for 3153 contacts (-66.1/contact) +
2D Compatibility (PS) -37832 + (NN) -11366 + (LL) 2728
1D Compatibility (HY) -13200 + (ID) 4300
Total energy: -272271.0 ( -86.35 by residue)
QMean score : 0.557
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