Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSKETEVIFDWRR-GVEYHSANPPLYDSSTFHQTSLGG-----DVKYDYARSGNPNRELLEEKLARLEQGKFAFAFASGIAAIS-AVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTVDTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQSPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISEALYL--IQNGTGNMLSAQDSWTLAKHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTT-----AHLEQAKNGGAVIGFRLADE-SKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLEDPDELIADIKYALKEAFNESIPHTIER |
| 2RFV Chain:A ((9-397)) | ----FNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARF--GYIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQ-EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKAT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188528 for 3280 contacts (-57.5/contact) +
2D Compatibility (PS) -40589 + (NN) -24792 + (LL) 1192
1D Compatibility (HY) -28800 + (ID) 7100
Total energy: -288617.0 ( -87.99 by residue)
QMean score : 0.632
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