Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFFIDNFD-SFSYNLVYELECLGYEVAVYQND-ID-P-SYLMGLMNEEPKTPLLFISPGPGNPNSS---------GNLLKIIAM-AKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALK----KHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHD-NIPMAIVNEEDKILAYQFHPESIMTLQGRALLEQSVGFLRELS
3L7N Chain:A ((1-185))
MRIHFILHETFEAPGAYLAWAALRGHDVSMTKVYRYEKLPKDID-------DFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSPKKEIGN-YLISLTEAGKMDSYLSDFSDDLLVGHWHGDMP-GLPDKAQVLAISQGCPRQIIKFG-PKQYAFQCHLEFTPELVAALIAQEDDLDTQSQT
General information:
TITO was launched using:
RESULT:
Template:
3L7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117746 for 1316 contacts (-89.5/contact) +
2D Compatibility (PS) -18251 + (NN) -10207 + (LL) 420
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -155584.0 ( -118.22 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_3L7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L7N-query.scw
PDB file :
Tito_Scwrl_3L7N.pdb
: