Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVL--ARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETVKNFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARMSVTQTLMA-EGIDVGGKLEIFDTDPDNATSIFTI |
| 3G1P Chain:A ((2-250)) | SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLADR-------WSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSK-LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQP-------QVMVMDCSHPP-----RADAPRNHCDLNTVLALNQVI---RSPRVILTHISHQFDAWLMENALPSGFEVGFDGMEIG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56047 for 1900 contacts (-29.5/contact) +
2D Compatibility (PS) -24691 + (NN) -1724 + (LL) 2548
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -87814.0 ( -46.22 by residue)
QMean score : 0.231
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