Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGHDWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK
3Q93 Chain:A ((24-169))
-SRLYTLVLVLQPQRVLLGMKK---RGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPV---ESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQK-KKFHGYFKFQGQDTILDYTLREVDT
General information:
TITO was launched using:
RESULT:
Template:
3Q93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65942 for 1087 contacts (-60.7/contact) +
2D Compatibility (PS) -16001 + (NN) -5836 + (LL) 452
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -98927.0 ( -91.01 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_3Q93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q93-query.scw
PDB file :
Tito_Scwrl_3Q93.pdb
: