Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
3FME Chain:A ((2-289)) | ----------------------------------------------------------------------------------------------MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR---NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF---------------AGCKPYMAPERINPELNQ--YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183510 for 2061 contacts (-89.0/contact) +
2D Compatibility (PS) -28475 + (NN) -18617 + (LL) 2320
1D Compatibility (HY) -32000 + (ID) 7750
Total energy: -268032.0 ( -130.05 by residue)
QMean score : 0.474
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