Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDVIISGGGLLGLITAVGLSNN------------SVSVAVIEKNNLPRIIDDNRAFAISQGSRKILEKLGIWQF--IESEA-EPILDICILD-ENSP------IT-VHYNHK-------------------M--------------------------VSEEPMGYVINSTVIWNAINNNF-LNKLNIYSL-HSYRTITCDA-G-YVEVTLGNNQKLISSLLICAEGKNSKL-PGLFSMSIIKF---DYKQSSIVFNVKHELHH-QNLAV--EQFFPGGPFAILPMKSGYTSSIVWTEKSEISKMLMNLSEEEFIIELKKRFGSYLGEVKLDGERKSYPLSFASAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMAVENSKFLKKRFIRHAMGFV |
| 2PYX Chain:A ((7-382)) | -ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD---VATIGVGEGTWPSMRSTLSKIGIDENDFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQK-LGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPT--RKGVGYVYSSSHTND--IDAQKTLFNYLGVD-GA-AA--DKLEP-RQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNRMVMDTISARVNERYQQHWQQIIDFLKLHYVISQRQEDRYWRDHRESNSIPDSLQAMLELWRYQTPSQQDISYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146302 for 2365 contacts (-61.9/contact) +
2D Compatibility (PS) -31988 + (NN) -3592 + (LL) 1332
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -190550.0 ( -80.57 by residue)
QMean score : 0.385
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