Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEYEQWKEILSAIDKETDLSKDNVIAKIKEKLKALDSSTYEEWKETNFDVNHLFAVKYGLLHLAVHNNLKNVVNALFGV---EGIDVNAVDKDKHTSLHLAVEKGHIGIVNSLLEVKADVNVEDENGKTPLYTAVQFGCKGEIEVLIGKMMIGALIRAG----ANVNAEDKDKCTPLHFAARCGRKEIVQTLIEAGANVNAAN-EDKRTPSHIATQFCRKEIVKVLVEAGADVRAADKYGITPLHFADGAETVKTLIGAGANVNVVDKDKRTPLHWVKGA---ETAETLIEAGVNVNTIDKGKRNPLHMAARCSCEGVIKTLIGKRADLLSKNNDSKIPSNFNKSHYIIRRVKSLWSEERMKRLDQQSKVSFVVFGLTILFGTATATTLFVTETIAFGPYPIIGTVVIVAAAAWVVSCAADKILEPSTKIDEMKAVQVDENMQKAPLNLST |
| 1K1A Chain:A ((125-352)) | ------------------------------------------------------EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRAL---------LDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA------------------------------SGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93918 for 1866 contacts (-50.3/contact) +
2D Compatibility (PS) -22702 + (NN) -3978 + (LL) 17180
1D Compatibility (HY) -6000 + (ID) 2750
Total energy: -112168.0 ( -60.11 by residue)
QMean score : 0.519
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