Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDDITSVSDQNFKSEVADYKGFVLVDFWAEWCRPCKNLMPRVEQLAKDKKGKIKICKFNIDGGAEVLSKYGIQSIPTLIIFQDGKEIARKIGTI--NDLSSWVDDEIS
2O8V Chain:B ((2-107))
--DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
General information:
TITO was launched using:
RESULT:
Template:
2O8V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75779 for 765 contacts (-99.1/contact) +
2D Compatibility (PS) -10858 + (NN) -2970 + (LL) 180
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -100627.0 ( -131.54 by residue)
QMean score : 0.777
(partial model without unconserved sides chains):
PDB file :
Tito_2O8V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O8V-query.scw
PDB file :
Tito_Scwrl_2O8V.pdb
: