Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
1Z34 Chain:A ((2-232))
---TPHNSA-QVGDFAETVLMCGDPLRAKLIAETYLENPKLVNNVRGIQGYTGTYKGKPISVMGHGMGLPSICIYAEELYSTYKVKTIIRVGTCGAIDMDIHTRDIVIFTSAGTNSKINRIRFMDHDYPATASFDVVCALVDAAKELNIPAKVGKGFSTDLFYNPQTELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILHHEE-----RQNSFQNMMKIALEAA
General information:
TITO was launched using:
RESULT:
Template:
1Z34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176994 for 2018 contacts (-87.7/contact) +
2D Compatibility (PS) -24406 + (NN) -8702 + (LL) 624
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -233878.0 ( -115.90 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_1Z34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z34-query.scw
PDB file :
Tito_Scwrl_1Z34.pdb
: