Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRL-----NSIIIEAADK-AR--------VPAGGALAVDRHDFSGYITETLKNHENITVINEE-I---------------------NAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL |
| 3NIX Chain:A ((4-171)) | EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRF------VIGESLLPRCMEHLD---EAGFL-DAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34831 for 937 contacts (-37.2/contact) +
2D Compatibility (PS) -13571 + (NN) 885 + (LL) 20496
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -33171.0 ( -35.40 by residue)
QMean score : 0.505
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