Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIP--GHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
1JE0 Chain:A ((3-235))
----PVHILAKKGEVAERVLVVGDPGRARLLST-LLQNPKLTNENRGFLVYTGKYNGETVSIATHGIGGPSIAIVLEELA-MLGANVFIRYGTTGALVPYINLGEYIIVTGASYNQGGLFYQYLRDNACVASTPDFELTNKLVTSFSKRNLKYYVGNVFSSDAFYAEDEEFVKKWSSRGNIAVEMECATLFTLSKVKGWKSATVLVVSDNLA-------EELEKSVMDGAKAVLDTLT
General information:
TITO was launched using:
RESULT:
Template:
1JE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157472 for 1915 contacts (-82.2/contact) +
2D Compatibility (PS) -23495 + (NN) -8192 + (LL) 228
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -203081.0 ( -106.05 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1JE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JE0-query.scw
PDB file :
Tito_Scwrl_1JE0.pdb
: